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openBis
Attributes
DescriptionDescribe your wet lab experiments or computer experiments and link to materials, samples, and protocols stored in the inventory.
ProviderTeam of ETH Zurich staff members Scientific IT Services
Information on Provider
Activity Statusactive
Information on ActiveLast Release: July 2023, v 20.10.7.1
Last checked on07.12.2023
Provider's data safety and data security strategies
Reference usersQBiC Tübingen, Christen Lab ETH Zürich, University of Zürich, Universität Hohenheim, Robert Koch Institut, DKFZ Heidelberg
Reviews
Exit strategyExport Builder: Export of experiments including tree structure
Communitydiscussion forum for the openBIS user community: https://community.openbis.ch;
to share openBIS data models and developements: https://github.com/openbis/community-data-models, https://github.com/openbis/community-tools-directory
Known users
General
LicenseOpen Source
SubjectGeneric, Life Sciences
PricingFree, Academic
VersionsDemo, Demo hosted by NFDI: https://demo.chemotion.scc.kit.edu, Demo version: openBIS ELN-LIMS Virtual Machine, Online-Demo: https://openbis-eln-lims.ethz.ch/openbis/webapp/eln-lims/?menuUniqueId=null&viewName=showBlancPage&viewData=null
Location of providerSwitzerland
Usability
Customizable user interface
LanguagesEnglish
SupportOnline documentation, Webinare, Videotutorials, FAQ, Changelog
Usage statistics
Offline functionalities
Core functions (Daily work)
Data inputBarcode Scanner, Table editor, With external links, Plain text editor, Browser forms, Sketches
Data import (formats)Document formats, Table formats, Structured formats, Compressed formats, Scientific formats, Image formats, zip, json, xml, Data bank
Data import (method)Drag & Drop / File Chooser, Automatic Import
Data exportFormats suitable for long term archiving, Formats suitable for publication, html, zip, MS Office Formats, csv/tsv, json, Barcodes, Labels
TemplatesImport of own templates, Preconfigured protocols, e.g. PCR, Western blotting
Search functionsAdvanced search, BLAST search, Search for dataset files, global search
CollaborationRole management, Rights management, Share settings, administrator rights
Compliance with legal requirements
Preservation of evidenceAudit Trail, Timestamping, Functions for accreditation
Compliance
Extended functions (Daily work)
Laboratory management functionsMaterials database, Sample Tracking, LIMS connectivity, Freezer Management, Inventory (devices)
Integrations and extensionsCreate own plug-ins, JupyterHub, FAIRDOM, PlasMapper, DSpace, FAIRDOM HITS, Zenodo
Automation
Device connectionDevice connection
Project management toolsProject management
WorkflowsWith workflows, Hyperlinks
Integration in RDM and IT environment
Application programming interfacesOther API, REST API, SDK, Python library, Java API, Online API documentation
Controlled vocabulary
Data accessBrowser based
Data storage locationLocal, Cloud
Type of external cloud
Location of data storage or processing
Level of data protection (e.g. certification)
Transport encryption
Data storage encryption
Access control
Guaranteed SLAs
Interval of Data Backups
Number of Data Backups
Data Backups Encrypted
Template for data processing agreement (DPA), including the technical and organizational measures (TOM)
Authentication methods
User account security measures
Usage optionOn-premises
Server operating systemWindows, MacOS, Linux